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    LOC100254271 triacylglycerol lipase 1 [ Vitis vinifera (wine grape) ]

    Gene ID: 100254271, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100254271
    Gene description
    triacylglycerol lipase 1
    Locus tag
    VIT_00037920001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100254271 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 3 NC_081807.1 (6331001..6337984, complement)
    102 previous assembly 12X (GCF_000003745.3) 3 NC_012009.3 (6356799..6364475, complement)

    Chromosome 3 - NC_081807.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104878833 Neighboring gene limonoid UDP-glucosyltransferase Neighboring gene ACT domain-containing protein ACR6-like Neighboring gene methylthioribose kinase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article
    2. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
    3. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    triacylglycerol lipase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081807.1 Reference ASM3070453v1 Primary Assembly

      Range
      6331001..6337984 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019219139.2 → XP_019074684.1  triacylglycerol lipase 1

      UniProtKB/TrEMBL
      A0A438EPH1, D7SXX3
    Nucleotide Protein
    Heading Accession and Version

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