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    LOC100255126 uncharacterized LOC100255126 [ Vitis vinifera (wine grape) ]

    Gene ID: 100255126, updated on 29-Sep-2023

    Summary

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    Gene symbol
    LOC100255126
    Gene description
    uncharacterized LOC100255126
    Locus tag
    VIT_00035034001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100255126 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 5 NC_081809.1 (861321..865885, complement)
    102 previous assembly 12X (GCF_000003745.3) 5 NC_012011.3 (1058353..1062927)

    Chromosome 5 - NC_081809.1Genomic Context describing neighboring genes Neighboring gene 3-oxo-Delta(4,5)-steroid 5-beta-reductase Neighboring gene 3-oxo-Delta(4,5)-steroid 5-beta-reductase Neighboring gene putative beta-D-xylosidase Neighboring gene acetate--CoA ligase CCL3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article
    2. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC100255126

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081809.1 Reference ASM3070453v1 Primary Assembly

      Range
      861321..865885 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002276169.4 → XP_002276205.1  uncharacterized protein LOC100255126 isoform X2

      See identical proteins and their annotated locations for XP_002276205.1

      UniProtKB/TrEMBL
      D7SY54
      Conserved Domains (1) summary
      pfam04667
      Location:11 → 90
      Endosulfine; cAMP-regulated phosphoprotein/endosulfine conserved region

    2. XM_059736702.1 → XP_059592685.1  uncharacterized protein LOC100255126 isoform X1

    3. XM_002276192.4 → XP_002276228.1  uncharacterized protein LOC100255126 isoform X2

      See identical proteins and their annotated locations for XP_002276228.1

      UniProtKB/TrEMBL
      D7SY54
      Conserved Domains (1) summary
      pfam04667
      Location:11 → 90
      Endosulfine; cAMP-regulated phosphoprotein/endosulfine conserved region
    Nucleotide Protein
    Heading Accession and Version

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