U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC100273380 Protein FATTY ACID EXPORT 3 chloroplastic [ Zea mays ]

    Gene ID: 100273380, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100273380
    Gene description
    Protein FATTY ACID EXPORT 3 chloroplastic
    Locus tag
    ZEAMMB73_Zm00001d012504
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G166441
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100273380 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 8 NC_050103.1 (176827493..176831904)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 8 NC_024466.2 (175572511..175576903)

    Chromosome 8 - NC_050103.1Genomic Context describing neighboring genes Neighboring gene DUF1692 domain, endoplasmic reticulum vescicle transporter protein Neighboring gene uncharacterized LOC100282083 Neighboring gene WRKY transcription factor WRKY71 Neighboring gene WRKY22 - superfamily of TFs having WRKY and zinc finger domains Neighboring gene clathrin heavy chain 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article
    2. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    3. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    4. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Protein FATTY ACID EXPORT 3, chloroplastic; uncharacterized protein LOC100273380
    Names
    non-green plastid inner envelope membrane protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001245909.2 → NP_001232838.2  Protein FATTY ACID EXPORT 3, chloroplastic

      Status: VALIDATED

      Source sequence(s)
      BT043460, DR970244
      UniProtKB/TrEMBL
      B4G272, B6T812
      Conserved Domains (1) summary
      pfam03647
      Location:206 → 302
      Tmemb_14; Transmembrane proteins 14C

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050103.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      176827493..176831904
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035961338.1 → XP_035817231.1  uncharacterized protein LOC100273380 isoform X1

      UniProtKB/TrEMBL
      B4FV44, B6T812
      Conserved Domains (1) summary
      pfam03647
      Location:215 → 311
      Tmemb_14; Transmembrane proteins 14C

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001147817.1: Suppressed sequence

      Description
      NM_001147817.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials