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    LOC100283846 uncharacterized LOC100283846 [ Zea mays ]

    Gene ID: 100283846, updated on 21-Jun-2023

    Summary

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    Gene symbol
    LOC100283846
    Gene description
    uncharacterized LOC100283846
    Locus tag
    ZEAMMB73_Zm00001d033925
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G416388
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    Genomic context

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    See LOC100283846 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 1 NC_050096.1 (280473742..280478439, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 1 NC_024459.2 (278704663..278709358, complement)

    Chromosome 1 - NC_050096.1Genomic Context describing neighboring genes Neighboring gene ATP synthase Neighboring gene uncharacterized LOC100191965 Neighboring gene uncharacterized LOC118476173 Neighboring gene E3 ubiquitin-protein ligase HOS1 Neighboring gene uncharacterized LOC100283483

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Gardiner J, et al. Plant Physiol, 2004 Apr. PMID 15020742, Free PMC Article
    2. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    3. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article
    4. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    CBS domain-containing protein CBSX3, mitochondrial; uncharacterized protein LOC100283846
    Names
    CBS domain protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001156744.2 → NP_001150216.1  CBS domain-containing protein CBSX3, mitochondrial

      See identical proteins and their annotated locations for NP_001150216.1

      Status: VALIDATED

      Source sequence(s)
      GJCA01005389, GJCA01052713
      UniProtKB/TrEMBL
      A0A317Y8Y6, A0A8J8XES5, B4G1D2
      Conserved Domains (1) summary
      cd04623
      Location:74 → 184
      CBS_pair_bac_euk; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes

    2. NM_001412592.1 → NP_001399521.1  CBS domain-containing protein CBSX3, mitochondrial

      Status: VALIDATED

      Source sequence(s)
      DV531797, GJCA01005389, GJCA01052713
      UniProtKB/TrEMBL
      A0A317Y8Y6, A0A8J8XES5, B4G1D2

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050096.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      280473742..280478439 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008679565.3 → XP_008677787.1  uncharacterized protein LOC100283846 isoform X1

      UniProtKB/TrEMBL
      B4G1D2
      Conserved Domains (1) summary
      cd04623
      Location:74 → 184
      CBS_pair_bac_euk; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes

    2. XM_035967588.1 → XP_035823481.1  uncharacterized protein LOC100283846 isoform X1

      UniProtKB/TrEMBL
      A0A317Y8Y6, A0A8J8XES5, B4G1D2
      Conserved Domains (1) summary
      cd04623
      Location:74 → 184
      CBS_pair_bac_euk; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes
    Nucleotide Protein
    Heading Accession and Version

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