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    pmt phosphoethanolamine methyltransferase [ Salmo salar (Atlantic salmon) ]

    Gene ID: 100380594, updated on 20-Apr-2024

    Summary

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    Gene symbol
    pmt
    Gene description
    phosphoethanolamine methyltransferase
    See related
    Ensembl:ENSSSAG00000057894
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmo salar
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
    Also known as
    peam3
    Orthologs
    zebrafish all
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    Genomic context

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    See pmt in Genome Data Viewer
    Location:
    chromosome: ssa05
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current Ssal_v3.1 (GCF_905237065.1) ssa05 NC_059446.1 (7936386..7994280)
    100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa05 NC_027304.1 (6642421..6664450)

    Chromosome ssa05 - NC_059446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106604170 Neighboring gene probable E3 ubiquitin-protein ligase MID2 Neighboring gene basic proline-rich protein-like Neighboring gene uncharacterized LOC123743072 Neighboring gene uncharacterized LOC123743071 Neighboring gene E3 ubiquitin-protein ligase TRIM39 Neighboring gene Platelet-derived growth factor receptor-like protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    phosphoethanolamine methyltransferase
    Names
    phosphoethanolamine N-methyltransferase 3
    NP_001167350.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001173879.1 → NP_001167350.1  phosphoethanolamine methyltransferase

      See identical proteins and their annotated locations for NP_001167350.1

      Status: PROVISIONAL

      Source sequence(s)
      BT059732
      UniProtKB/TrEMBL
      A0A1S3RP24, C0HBM6
      Related
      ENSSSAP00000064106.2, ENSSSAT00000094716.2
      Conserved Domains (3) summary
      PLN02336
      Location:14 → 495
      PLN02336; phosphoethanolamine N-methyltransferase
      pfam08241
      Location:55 → 151
      Methyltransf_11; Methyltransferase domain
      cl17173
      Location:275 → 421
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ssal_v3.1

    Genomic

    1. NC_059446.1 Reference Ssal_v3.1

      Range
      7936386..7994280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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