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    LOC100384565 uncharacterized LOC100384565 [ Zea mays ]

    Gene ID: 100384565, updated on 18-Aug-2023

    Summary

    Gene symbol
    LOC100384565
    Gene description
    uncharacterized LOC100384565
    Locus tag
    ZEAMMB73_Zm00001d006108
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    HRGP; GRMZM2G099780
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    Genomic context

    See LOC100384565 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 2 NC_050097.1 (198549589..198556492)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 2 NC_024460.2 (198339970..198346856)

    Chromosome 2 - NC_050097.1Genomic Context describing neighboring genes Neighboring gene NAC domain-containing protein 18 Neighboring gene pyruvate dehydrogenase E1 beta subunit Neighboring gene MIR169jHG Neighboring gene uncharacterized LOC100282714 Neighboring gene microRNA MIR169j

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    uncharacterized protein LOC100384565
    Names
    hydroxyproline-rich glycoprotein family protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001177076.1NP_001170547.1  uncharacterized protein LOC100384565

      See identical proteins and their annotated locations for NP_001170547.1

      Status: PREDICTED

      Source sequence(s)
      BT083660
      UniProtKB/TrEMBL
      C4IYL3, E1U817
      Conserved Domains (2) summary
      cd07307
      Location:45233
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
      cl25836
      Location:468612
      Retinal; Retinal protein

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050097.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      198549589..198556492
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020547935.2XP_020403524.1  uncharacterized protein LOC100384565 isoform X1

      UniProtKB/TrEMBL
      A0A804MPR8, E1U817
      Conserved Domains (2) summary
      cd07307
      Location:45238
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
      cl25836
      Location:473617
      Retinal; Retinal protein
    2. XM_035964966.1XP_035820859.1  uncharacterized protein LOC100384565 isoform X4

      UniProtKB/TrEMBL
      A0A1D6ESX5, A0A1D6ESY0
      Conserved Domains (1) summary
      cd07307
      Location:1120
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    3. XM_020547936.3XP_020403525.1  uncharacterized protein LOC100384565 isoform X2

      UniProtKB/TrEMBL
      A0A1D6ESX4
      Conserved Domains (2) summary
      cd07307
      Location:1193
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
      cl25836
      Location:428572
      Retinal; Retinal protein
    4. XM_020547937.3XP_020403526.1  uncharacterized protein LOC100384565 isoform X3

      UniProtKB/TrEMBL
      A0A1D6ESY0
      Conserved Domains (1) summary
      cd07307
      Location:1125
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature