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    mgst3a microsomal glutathione S-transferase 3a [ Ictalurus punctatus (channel catfish) ]

    Gene ID: 100528993, updated on 20-Aug-2024

    Summary

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    Gene symbol
    mgst3a
    Gene description
    microsomal glutathione S-transferase 3a
    See related
    EnsemblRapid:ENSIPUG00020016401
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ictalurus punctatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
    Also known as
    mgst3
    Orthologs
    human zebrafish all
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    Genomic context

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    See mgst3a in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_03 current Coco_2.0 (GCF_001660625.3) 25 NC_030440.2 (11056752..11060283, complement)
    101 previous assembly IpCoco_1.2 (GCF_001660625.2) 25 NC_030440.1 (8721963..8725499)

    Chromosome 25 - NC_030440.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108257901 Neighboring gene uncharacterized LOC108257899 Neighboring gene metabolism of cobalamin associated C Neighboring gene cytochrome P450 2J2 Neighboring gene cytochrome P450 2D28-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of full-length cDNAs in channel catfish (Ictalurus punctatus) and blue catfish (Ictalurus furcatus). Chen F, et al. PLoS One, 2010 Jul 12. PMID 20634964, Free PMC Article
    2. Transcriptome Display During Testicular Differentiation of Channel Catfish (Ictalurus punctatus) as Revealed by RNA-Seq Analysis. Zeng Q, et al. Biol Reprod, 2016 Jul. PMID 27307075, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutathione peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glutathione transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    microsomal glutathione S-transferase 3a
    Names
    microsomal glutathione S-transferase 3
    NP_001188192.1
    XP_017310855.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001201263.2 → NP_001188192.1  microsomal glutathione S-transferase 3a

      See identical proteins and their annotated locations for NP_001188192.1

      Status: PROVISIONAL

      Source sequence(s)
      GU589164
      UniProtKB/TrEMBL
      E3TFN0
      Related
      ENSIPUP00020033326.1, ENSIPUT00020039078.1
      Conserved Domains (1) summary
      pfam01124
      Location:11 → 120
      MAPEG; MAPEG family

    RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Coco_2.0 Primary Assembly

    Genomic

    1. NC_030440.2 Reference Coco_2.0 Primary Assembly

      Range
      11056752..11060283 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017455366.3 → XP_017310855.1  microsomal glutathione S-transferase 3a isoform X1

      UniProtKB/TrEMBL
      E3TFN0
      Conserved Domains (1) summary
      pfam01124
      Location:11 → 120
      MAPEG; MAPEG family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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