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    tnni1 troponin I1, slow skeletal type [ Anolis carolinensis (green anole) ]

    Gene ID: 100565698, updated on 8-Mar-2024

    Summary

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    Gene symbol
    tnni1
    Gene description
    troponin I1, slow skeletal type
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anolis carolinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
    Orthologs
    human mouse all
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    Genomic context

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    See tnni1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 4 NC_085844.1 (211114277..211121588, complement)
    102 previous assembly AnoCar2.0 (GCF_000090745.1) 4 NC_014779.1 (131462110..131474610, complement)

    Chromosome 4 - NC_085844.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134298438 Neighboring gene ladinin 1 Neighboring gene pleckstrin homology like domain family A member 3 Neighboring gene cysteine and glycine rich protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cardiac muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in skeletal muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of troponin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    troponin I, slow skeletal muscle
    Names
    troponin I type 1 (skeletal, slow)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAnoCar3.1.pri

    Genomic

    1. NC_085844.1 Reference rAnoCar3.1.pri

      Range
      211114277..211121588 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008109879.3 → XP_008108086.2  troponin I, slow skeletal muscle

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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