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    LOC100683490 protein MIS12 homolog [ Canis lupus familiaris (dog) ]

    Gene ID: 100683490, updated on 22-Jan-2024

    Summary

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    Gene symbol
    LOC100683490
    Gene description
    protein MIS12 homolog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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    Genomic context

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    See LOC100683490 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (125748360..125749724)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (107600401..107601765, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (123796788..123798152)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (121515510..121516874)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (124030710..124032074)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 7 subfamily R member 1 Neighboring gene olfactory receptor family 1 subfamily D member 6 Neighboring gene EKC/KEOPS complex subunit LAGE3-like Neighboring gene EKC/KEOPS complex subunit LAGE3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in kinetochore assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic sister chromatid segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein MIS12 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      125748360..125749724
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038449235.1 → XP_038305163.1  protein MIS12 homolog

      UniProtKB/TrEMBL
      A0A8C0K500
      Conserved Domains (1) summary
      pfam05859
      Location:17 → 103
      Mis12; Mis12 protein

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      121515510..121516874
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038524891.1 → XP_038380819.1  protein MIS12 homolog

      Conserved Domains (1) summary
      pfam05859
      Location:17 → 103
      Mis12; Mis12 protein

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      124030710..124032074
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038651185.1 → XP_038507113.1  protein MIS12 homolog

      Conserved Domains (1) summary
      pfam05859
      Location:17 → 103
      Mis12; Mis12 protein

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      123796788..123798152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038588860.1 → XP_038444788.1  protein MIS12 homolog

      UniProtKB/TrEMBL
      A0A8C0K500
      Conserved Domains (1) summary
      pfam05859
      Location:17 → 103
      Mis12; Mis12 protein

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      107600401..107601765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014111367.1 → XP_013966842.1  protein MIS12 homolog

      UniProtKB/TrEMBL
      A0A8C0K500
      Conserved Domains (1) summary
      pfam05859
      Location:17 → 103
      Mis12; Mis12 protein
    Nucleotide Protein
    Heading Accession and Version

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