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    myoz2a myozenin 2a [ Oreochromis niloticus (Nile tilapia) ]

    Gene ID: 100711584, updated on 8-Mar-2024

    Summary

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    Gene symbol
    myoz2a
    Gene description
    myozenin 2a
    See related
    Ensembl:ENSONIG00000007614
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oreochromis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
    Expression
    Biased expression in heart (RPKM 50.1), skeletal muscle (RPKM 26.6) and 4 other tissues See more
    Orthologs
    zebrafish all
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    Genomic context

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    See myoz2a in Genome Data Viewer
    Location:
    chromosome: LG3
    Exon count:
    6
    Annotation release Status Assembly LG Location
    104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG3 NC_031967.2 (12476572..12485637)
    103 previous assembly ASM185804v2 (GCF_001858045.1) LG3b NC_031968.1 (776001..785085)

    Linkage Group LG3 - NC_031967.2Genomic Context describing neighboring genes Neighboring gene SEC24 homolog D, COPII coat complex component Neighboring gene synaptopodin 2 Neighboring gene ubiquitin specific peptidase 53 Neighboring gene uncharacterized LOC109197076

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
    • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
    • BioProject: PRJNA78915
    • Analysis date: Fri Dec 29 00:23:36 2017

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables FATZ binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables telethonin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Z disc IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myozenin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference O_niloticus_UMD_NMBU Primary Assembly

    Genomic

    1. NC_031967.2 Reference O_niloticus_UMD_NMBU Primary Assembly

      Range
      12476572..12485637
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003450327.5 → XP_003450375.1  myozenin-2

      See identical proteins and their annotated locations for XP_003450375.1

      UniProtKB/TrEMBL
      I3JL52
      Related
      ENSONIP00000009596.1, ENSONIT00000009602.2
      Conserved Domains (1) summary
      pfam05556
      Location:1 → 267
      Calsarcin; Calcineurin-binding protein (Calsarcin)

    2. XM_005468203.4 → XP_005468260.1  myozenin-2

      See identical proteins and their annotated locations for XP_005468260.1

      UniProtKB/TrEMBL
      I3JL52
      Conserved Domains (1) summary
      pfam05556
      Location:1 → 267
      Calsarcin; Calcineurin-binding protein (Calsarcin)

    3. XM_019352587.2 → XP_019208132.1  myozenin-2

      UniProtKB/TrEMBL
      I3JL52
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases