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    LOC100880512 beta-1,3-glucan-binding protein-like [ Megachile rotundata (alfalfa leafcutting bee) ]

    Gene ID: 100880512, updated on 1-Oct-2024

    Summary

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    Gene symbol
    LOC100880512
    Gene description
    beta-1,3-glucan-binding protein-like
    See related
    EnsemblRapid:LOC100880512
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Megachile rotundata
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Megachile
    Orthologs
    honey bee all
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    Genomic context

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    See LOC100880512 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current MROT_1.0 (GCF_000220905.1) Unplaced Scaffold NW_003797054.1 (687083..690699)

    NW_003797054.1Genomic Context describing neighboring genes Neighboring gene pyruvate kinase-like Neighboring gene short neuropeptide F-like Neighboring gene uncharacterized LOC100879507 Neighboring gene mitochondrial ribosomal protein S10 Neighboring gene frataxin Neighboring gene probable 28S ribosomal protein S10, mitochondrial Neighboring gene uncharacterized LOC100880738

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003797054.1 Unplaced Scaffold Reference MROT_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-1,3-glucan-binding protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Megachile rotundata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MROT_1.0

    Genomic

    1. NW_003797054.1 Reference MROT_1.0

      Range
      687083..690699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012286344.1 → XP_012141734.1  beta-1,3-glucan-binding protein-like

      Related
      XP_012141734.1, XM_012286344.1
      Conserved Domains (2) summary
      pfam15886
      Location:30 → 134
      CBM39; Carbohydrate binding domain (family 32)
      cl22861
      Location:144 → 461
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    Nucleotide Protein
    Heading Accession and Version

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