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    ich zinc finger protein ichor [ Megachile rotundata (alfalfa leafcutting bee) ]

    Gene ID: 100883977, updated on 10-Oct-2024

    Summary

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    Gene symbol
    ich
    Gene description
    zinc finger protein ichor
    See related
    EnsemblRapid:LOC100883977
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Megachile rotundata
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Megachile
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See ich in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current MROT_1.0 (GCF_000220905.1) Unplaced Scaffold NW_003797066.1 (178137..212662, complement)

    NW_003797066.1Genomic Context describing neighboring genes Neighboring gene carboxylesterase 1E Neighboring gene uncharacterized LOC100883871 Neighboring gene uncharacterized LOC100883420 Neighboring gene carbonic anhydrase beta Neighboring gene Ras-related GTP binding A/B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003797066.1 Unplaced Scaffold Reference MROT_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of aryl hydrocarbon receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC100883977

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Megachile rotundata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MROT_1.0

    Genomic

    1. NW_003797066.1 Reference MROT_1.0

      Range
      178137..212662 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012283205.1 → XP_012138595.1  uncharacterized protein LOC100883977

      Related
      XP_012138595.1, XM_012283205.1
      Conserved Domains (3) summary
      sd00017
      Location:1114 → 1134
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:786 → 808
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:1126 → 1151
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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