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    Lrrc51 leucine rich repeat containing 51 [ Octodon degus (degu) ]

    Gene ID: 101587115, updated on 30-May-2024

    Summary

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    Gene symbol
    Lrrc51
    Gene description
    leucine rich repeat containing 51
    See related
    Ensembl:ENSODEG00000008284
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Octodon degus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
    Orthologs
    human mouse all
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    Genomic context

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    See Lrrc51 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524722.1 (2999093..3017467, complement)

    NW_004524722.1Genomic Context describing neighboring genes Neighboring gene anaphase promoting complex subunit 15 Neighboring gene transmembrane O-methyltransferase Neighboring gene nuclear mitotic apparatus protein 1 Neighboring gene interleukin 18 binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004524722 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine rich repeat containing 51; leucine-rich repeat-containing protein 51
    NP_001268958.1
    XP_023557778.1
    XP_023557779.1
    XP_023557780.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001282029.1 → NP_001268958.1  leucine-rich repeat-containing protein 51

      Status: VALIDATED

      Source sequence(s)
      AJSA01174842
      UniProtKB/TrEMBL
      A0A6P6DCF4
      Related
      ENSODEP00000011138.1, ENSODET00000011294.1
      Conserved Domains (2) summary
      sd00031
      Location:51 → 80
      LRR_1; leucine-rich repeat [structural motif]
      pfam14580
      Location:89 → 173
      LRR_9; Leucine-rich repeat

    RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OctDeg1.0 Primary Assembly

    Genomic

    1. NW_004524722.1 Reference OctDeg1.0 Primary Assembly

      Range
      2999093..3017467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023702012.1 → XP_023557780.1  leucine rich repeat containing 51 isoform X1

      UniProtKB/TrEMBL
      A0A6P6DCF4
      Conserved Domains (2) summary
      sd00031
      Location:51 → 80
      LRR_1; leucine-rich repeat [structural motif]
      pfam14580
      Location:89 → 173
      LRR_9; Leucine-rich repeat

    2. XM_023702010.1 → XP_023557778.1  leucine rich repeat containing 51 isoform X1

      UniProtKB/TrEMBL
      A0A6P6DCF4
      Conserved Domains (2) summary
      sd00031
      Location:51 → 80
      LRR_1; leucine-rich repeat [structural motif]
      pfam14580
      Location:89 → 173
      LRR_9; Leucine-rich repeat

    3. XM_023702011.1 → XP_023557779.1  leucine rich repeat containing 51 isoform X1

      UniProtKB/TrEMBL
      A0A6P6DCF4
      Conserved Domains (2) summary
      sd00031
      Location:51 → 80
      LRR_1; leucine-rich repeat [structural motif]
      pfam14580
      Location:89 → 173
      LRR_9; Leucine-rich repeat
    Nucleotide Protein
    Heading Accession and Version

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