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    CNN1 calponin 1 [ Mustela putorius furo (domestic ferret) ]

    Gene ID: 101688825, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CNN1
    Gene description
    calponin 1
    See related
    Ensembl:ENSMPUG00000004922
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mustela putorius furo (sub-species: furo)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
    Also known as
    calponin; Calponin-1
    Orthologs
    human mouse all
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    Genomic context

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    See CNN1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421280.1 (32859584..32866335, complement)
    101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569165.1 (2108362..2115136, complement)

    NW_025421280.1Genomic Context describing neighboring genes Neighboring gene acid phosphatase 5, tartrate resistant Neighboring gene elongation factor 1 Neighboring gene ECSIT signaling integrator Neighboring gene zinc finger protein 653

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actomyosin structure organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calponin-1
    Names
    Basic calponin
    Calponin H1, smooth muscle
    basic H1 calponin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001310211.1 → NP_001297140.1  calponin-1

      See identical proteins and their annotated locations for NP_001297140.1

      Status: PROVISIONAL

      Source sequence(s)
      AF323674
      UniProtKB/Swiss-Prot
      Q9GK38
      UniProtKB/TrEMBL
      M3Y0N1
      Conserved Domains (3) summary
      COG5199
      Location:18 → 188
      SCP1; Calponin [Cytoskeleton]
      pfam00307
      Location:29 → 127
      CH; Calponin homology (CH) domain
      pfam00402
      Location:164 → 187
      Calponin; Calponin family repeat

    RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1176430v1.1 Primary Assembly

    Genomic

    1. NW_025421280.1 Reference ASM1176430v1.1 Primary Assembly

      Range
      32859584..32866335 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045077429.1 → XP_044933364.1  calponin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8U0UYG7, M3Y0N1
      Conserved Domains (1) summary
      COG5199
      Location:1 → 138
      SCP1; Calponin [Cytoskeleton]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9GK38.1 GenPept UniProtKB/Swiss-Prot:Q9GK38

    Gene LinkOut

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