U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Naca nascent polypeptide associated complex subunit alpha [ Chinchilla lanigera (long-tailed chinchilla) ]

    Gene ID: 102014422, updated on 10-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Naca
    Gene description
    nascent polypeptide associated complex subunit alpha
    See related
    Ensembl:ENSCLAG00000013441
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Chinchilla lanigera
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
    Also known as
    NAC-alpha; alpha-NAC
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Naca in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955458.1 (4251679..4265430, complement)

    NW_004955458.1Genomic Context describing neighboring genes Neighboring gene prostaglandin E synthase 3 Neighboring gene spindle and kinetochore-associated protein 3 pseudogene Neighboring gene uncharacterized LOC106149972 Neighboring gene DNA primase subunit 1 Neighboring gene 17-beta-hydroxysteroid dehydrogenase type 6-like Neighboring gene nuclear receptor-binding factor 2-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_004955458.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein targeting to membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nascent polypeptide-associated complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    nascent polypeptide-associated complex subunit alpha
    Names
    nascent polypeptide-associated complex alpha subunit
    XP_013376240.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001282372.2 → NP_001269301.2  nascent polypeptide-associated complex subunit alpha

      Status: VALIDATED

      Source sequence(s)
      AGCD01047394, AGCD01047395
      UniProtKB/Swiss-Prot
      Q6QN10
      UniProtKB/TrEMBL
      A0A8C2VRJ3
      Related
      ENSCLAP00000019588.1, ENSCLAT00000019781.1
      Conserved Domains (2) summary
      cd14415
      Location:169 → 214
      UBA_NACA_NACP1; UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and putative NACA-like protein (NACP1)
      cd22054
      Location:84 → 131
      NAC_NACA; nascent polypeptide-associated complex (NAC), alpha subunit

    RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ChiLan1.0 Primary Assembly

    Genomic

    1. NW_004955458.1 Reference ChiLan1.0 Primary Assembly

      Range
      4251679..4265430 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013520786.1 → XP_013376240.1  nascent polypeptide-associated complex subunit alpha isoform X1

      UniProtKB/Swiss-Prot
      Q6QN10
      UniProtKB/TrEMBL
      A0A8C2VRJ3
      Related
      ENSCLAP00000019587.1, ENSCLAT00000019780.1
      Conserved Domains (2) summary
      cd14415
      Location:169 → 214
      UBA_NACA_NACP1; UBA-like domain found in nascent polypeptide-associated complex subunit alpha (NACA) and putative NACA-like protein (NACP1)
      cd22054
      Location:84 → 131
      NAC_NACA; nascent polypeptide-associated complex (NAC), alpha subunit
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6QN10.1 GenPept UniProtKB/Swiss-Prot:Q6QN10

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.