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    CTSK cathepsin K [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102352136, updated on 2-May-2024

    Summary

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    Gene symbol
    CTSK
    Gene description
    cathepsin K
    See related
    Ensembl:ENSLACG00000014487
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Orthologs
    zebrafish all
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    Genomic context

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    See CTSK in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 6 NC_088144.1 (115942008..115962939)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819685.1 (1033879..1052412)

    Chromosome 6 - NC_088144.1Genomic Context describing neighboring genes Neighboring gene cortexin domain-containing 1 protein-like Neighboring gene aryl hydrocarbon receptor nuclear translocator Neighboring gene cathepsin S-like Neighboring gene THAP domain-containing protein 10-like Neighboring gene 5S ribosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cathepsin K

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088144.1 Reference fLatCha1.pri

      Range
      115942008..115962939
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006001186.3 → XP_006001248.1  cathepsin K

      See identical proteins and their annotated locations for XP_006001248.1

      UniProtKB/TrEMBL
      H3B3H0
      Conserved Domains (2) summary
      pfam00112
      Location:119 → 332
      Peptidase_C1; Papain family cysteine protease
      pfam08246
      Location:28 → 87
      Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)

    2. XM_006001185.3 → XP_006001247.1  cathepsin K

      See identical proteins and their annotated locations for XP_006001247.1

      UniProtKB/TrEMBL
      H3B3H0
      Conserved Domains (2) summary
      pfam00112
      Location:119 → 332
      Peptidase_C1; Papain family cysteine protease
      pfam08246
      Location:28 → 87
      Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)

    3. XM_006001184.3 → XP_006001246.1  cathepsin K

      See identical proteins and their annotated locations for XP_006001246.1

      UniProtKB/TrEMBL
      H3B3H0
      Related
      ENSLACP00000022830.1
      Conserved Domains (2) summary
      pfam00112
      Location:119 → 332
      Peptidase_C1; Papain family cysteine protease
      pfam08246
      Location:28 → 87
      Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
    Nucleotide Protein
    Heading Accession and Version

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