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    LYL1 LYL1 basic helix-loop-helix family member [ Alligator mississippiensis (American alligator) ]

    Gene ID: 102558472, updated on 8-May-2024

    Summary

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    Gene symbol
    LYL1
    Gene description
    LYL1 basic helix-loop-helix family member
    Locus tag
    Y1Q_0006514
    See related
    EnsemblRapid:ENSAMIG00015025921
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Alligator mississippiensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
    Orthologs
    human mouse all
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    Genomic context

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    See LYL1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current rAllMis1 (GCF_030867095.1) 8 NC_081831.1 (22549380..22556005)
    102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709962.1 (36576..43307)

    Chromosome 8 - NC_081831.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1 Neighboring gene acid phosphatase 5, tartrate resistant Neighboring gene nuclear factor I X Neighboring gene GADD45G interacting protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein lyl-1
    Names
    lymphoblastic leukemia derived sequence 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAllMis1 Primary Assembly

    Genomic

    1. NC_081831.1 Reference rAllMis1 Primary Assembly

      Range
      22549380..22556005
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006262345.3 → XP_006262407.2  protein lyl-1

      UniProtKB/TrEMBL
      A0A151NMC3
      Related
      ENSAMIP00015035638.1, ENSAMIT00015049095.1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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