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    LOC102625327 probable indole-3-pyruvate monooxygenase YUCCA3 [ Citrus sinensis (sweet orange) ]

    Gene ID: 102625327, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC102625327
    Gene description
    probable indole-3-pyruvate monooxygenase YUCCA3
    Locus tag
    KPL70_026417
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Citrus sinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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    Genomic context

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    See LOC102625327 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current DVS_A1.0 (GCF_022201045.2) 9 NC_068564.1 (22214721..22216994, complement)
    102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) Unplaced Scaffold NW_006257125.1 (108461..110638, complement)

    Chromosome 9 - NC_068564.1Genomic Context describing neighboring genes Neighboring gene protein BLISTER Neighboring gene 7-hydroxymethyl chlorophyll a reductase, chloroplastic Neighboring gene myosin-6 Neighboring gene uncharacterized LOC102625890

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables N,N-dimethylaniline monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable indole-3-pyruvate monooxygenase YUCCA3
    Names
    putative indole-3-pyruvate monooxygenase YUCCA3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DVS_A1.0 Primary Assembly

    Genomic

    1. NC_068564.1 Reference DVS_A1.0 Primary Assembly

      Range
      22214721..22216994 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006493927.4 → XP_006493990.2  probable indole-3-pyruvate monooxygenase YUCCA3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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