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    LOC102698128 MAP7 domain-containing protein 2-like [ Lepisosteus oculatus (spotted gar) ]

    Gene ID: 102698128, updated on 21-Oct-2024

    Summary

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    Gene symbol
    LOC102698128
    Gene description
    MAP7 domain-containing protein 2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lepisosteus oculatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
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    Genomic context

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    See LOC102698128 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_09 current fLepOcu1.hap2 (GCF_040954835.1) 5 NC_090700.1 (4559685..4589949, complement)
    101 previous assembly LepOcu1 (GCF_000242695.1) Linkage Group LG3 NC_023181.1 (4544076..4551853, complement)

    Chromosome 5 - NC_090700.1Genomic Context describing neighboring genes Neighboring gene BCLAF1 and THRAP3 family member 3 Neighboring gene BCLAF1 and THRAP3 family member 3 Neighboring gene eukaryotic translation initiation factor 1A X-linked Neighboring gene ribosomal protein S6 kinase alpha-3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MAP7 domain-containing protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_040954835.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLepOcu1.hap2

    Genomic

    1. NC_090700.1 Reference fLepOcu1.hap2

      Range
      4559685..4589949 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_069189898.1 → XP_069045999.1  MAP7 domain-containing protein 2-like isoform X5

    2. XM_069189895.1 → XP_069045996.1  MAP7 domain-containing protein 2-like isoform X2

    3. XM_069189899.1 → XP_069046000.1  MAP7 domain-containing protein 2-like isoform X6

    4. XM_069189894.1 → XP_069045995.1  MAP7 domain-containing protein 2-like isoform X1

    5. XM_069189896.1 → XP_069045997.1  MAP7 domain-containing protein 2-like isoform X3

    6. XM_069189897.1 → XP_069045998.1  MAP7 domain-containing protein 2-like isoform X4

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases