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    ACKR2 atypical chemokine receptor 2 [ Chelonia mydas (Green sea turtle) ]

    Gene ID: 102939772, updated on 10-Mar-2024

    Summary

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    Gene symbol
    ACKR2
    Gene description
    atypical chemokine receptor 2
    Locus tag
    UY3_02993
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelonia mydas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
    Orthologs
    human mouse all
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    Genomic context

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    See ACKR2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (253748115..253760497)
    102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (253748118..253760002)

    Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 13 Neighboring gene HIG1 hypoxia inducible domain family member 1A Neighboring gene 5-beta-cholestane-3-alpha,7-alpha-diol 12-alpha-hydroxylase Neighboring gene obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF Neighboring gene uncharacterized LOC119565434

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables C-C chemokine receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    atypical chemokine receptor 2
    Names
    Chemokine-binding protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rCheMyd1.pri.v2 Primary Assembly

    Genomic

    1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

      Range
      253748115..253760497
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027817938.3 → XP_027673739.1  atypical chemokine receptor 2

      UniProtKB/TrEMBL
      M7BPH8
      Conserved Domains (1) summary
      cd15188
      Location:44 → 320
      7tmA_ACKR2_D6; atypical chemokine receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors

    2. XM_043541676.1 → XP_043397611.1  atypical chemokine receptor 2

      UniProtKB/TrEMBL
      M7BPH8
      Conserved Domains (1) summary
      cd15188
      Location:44 → 320
      7tmA_ACKR2_D6; atypical chemokine receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors

    3. XM_043541675.1 → XP_043397610.1  atypical chemokine receptor 2

      UniProtKB/TrEMBL
      M7BPH8
      Conserved Domains (1) summary
      cd15188
      Location:44 → 320
      7tmA_ACKR2_D6; atypical chemokine receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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