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    zgc:113363 MDFI domain-containing protein [ Astyanax mexicanus (Mexican tetra) ]

    Gene ID: 103029799, updated on 11-Mar-2024

    Summary

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    Gene symbol
    zgc:113363
    Gene description
    MDFI domain-containing protein
    See related
    EnsemblRapid:ENSAMXG00025023286
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Astyanax mexicanus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
    Orthologs
    zebrafish all
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current AstMex3_surface (GCF_023375975.1) 12 NC_064419.1 (4280855..4290740, complement)
    102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 6 NC_035902.1 (52468391..52478268)

    Chromosome 12 - NC_064419.1Genomic Context describing neighboring genes Neighboring gene FYVE, RhoGEF and PH domain containing 1 Neighboring gene transcription factor binding to IGHM enhancer 3a Neighboring gene CXXC finger protein 1a Neighboring gene methyl-CpG binding domain protein 1a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    myoD family inhibitor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AstMex3_surface

    Genomic

    1. NC_064419.1 Reference AstMex3_surface

      Range
      4280855..4290740 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007245833.4 → XP_007245895.1  myoD family inhibitor

      UniProtKB/TrEMBL
      A0A3B1K8S0, A0A8B9LD82
      Related
      ENSAMXP00025035289.1, ENSAMXT00025046564.1
      Conserved Domains (1) summary
      pfam15316
      Location:70 → 250
      MDFI; MyoD family inhibitor
    Nucleotide Protein
    Heading Accession and Version

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