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    ndufb4 NADH:ubiquinone oxidoreductase subunit B4 [ Astyanax mexicanus (Mexican tetra) ]

    Gene ID: 103041781, updated on 26-Jun-2024

    Summary

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    Gene symbol
    ndufb4
    Gene description
    NADH:ubiquinone oxidoreductase subunit B4
    See related
    EnsemblRapid:ENSAMXG00025031248
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Astyanax mexicanus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
    Orthologs
    human zebrafish all
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    Genomic context

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    See ndufb4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current AstMex3_surface (GCF_023375975.1) 1 NC_064408.1 (99308156..99312758)
    102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 3 NC_035899.1 (19068168..19072733, complement)

    Chromosome 1 - NC_064408.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 33ba Neighboring gene rhophilin associated tail protein 1-like Neighboring gene homogentisate 1,2-dioxygenase Neighboring gene aristaless related homeobox a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
    Names
    NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AstMex3_surface

    Genomic

    1. NC_064408.1 Reference AstMex3_surface

      Range
      99308156..99312758
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007252286.4 → XP_007252348.1  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4

      See identical proteins and their annotated locations for XP_007252348.1

      UniProtKB/TrEMBL
      A0A3B1IDW4, A0A3B1KKP9, A0A8B9KE95
      Related
      ENSAMXP00025050416.1, ENSAMXT00025065185.1
      Conserved Domains (1) summary
      pfam07225
      Location:3 → 126
      NDUF_B4; NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)
    Nucleotide Protein
    Heading Accession and Version

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