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    LOC103181792 forkhead box protein G1-like [ Callorhinchus milii (elephant shark) ]

    Gene ID: 103181792, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103181792
    Gene description
    forkhead box protein G1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callorhinchus milii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
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    Genomic context

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    See LOC103181792 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704744.1 (62728537..62729774)
    100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890115.1 (3999722..4001021)

    NW_024704744.1Genomic Context describing neighboring genes Neighboring gene arginase-1-like Neighboring gene uncharacterized LOC103181778 Neighboring gene solute carrier family 30 member 6 Neighboring gene protein CEBPZOS-like Neighboring gene CCAAT enhancer binding protein zeta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein G1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IMCB_Cmil_1.0 Primary Assembly

    Genomic

    1. NW_024704744.1 Reference IMCB_Cmil_1.0 Primary Assembly

      Range
      62728537..62729774
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007898480.2 → XP_007896671.1  forkhead box protein G1-like

      UniProtKB/TrEMBL
      A0A4W3K7E8
      Conserved Domains (1) summary
      smart00339
      Location:117 → 205
      FH; FORKHEAD
    Nucleotide Protein
    Heading Accession and Version

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