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    GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 103891410, updated on 26-Mar-2024

    Summary

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    Gene symbol
    GPIHBP1
    Gene description
    glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
    Locus tag
    CR201_G0053336
    See related
    Ensembl:ENSPPYG00000018930
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
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    Genomic context

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    See GPIHBP1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 7 NC_071992.2 (159707067..159711013)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 8 NC_071993.1 (163341237..163345182)

    Chromosome 7 - NC_071992.2Genomic Context describing neighboring genes Neighboring gene lymphocyte antigen 6 family member L Neighboring gene lymphocyte antigen 6 family member H Neighboring gene uncharacterized LOC129047565 Neighboring gene ZFP41 zinc finger protein Neighboring gene GLI family zinc finger 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chylomicron binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables lipase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of lipoprotein lipase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in triglyceride homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_071992.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      159707067..159711013
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024251268.3 → XP_024107036.1  glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A2J8R6W9, A0A6D2WYV9, H2PRC4
      Related
      ENSPPYP00000021234.2
      Conserved Domains (1) summary
      cd00117
      Location:63 → 139
      LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...

    2. XM_063726471.1 → XP_063582541.1  glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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