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    TRIM8 tripartite motif containing 8 [ Egretta garzetta (little egret) ]

    Gene ID: 104125629, updated on 3-Aug-2024

    Summary

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    Gene symbol
    TRIM8
    Gene description
    tripartite motif containing 8
    Locus tag
    Z169_01731
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Egretta garzetta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See TRIM8 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259594.1 (672549..699797, complement)

    NW_009259594.1Genomic Context describing neighboring genes Neighboring gene sideroflexin 2 Neighboring gene ARF like GTPase 3 Neighboring gene SUFU negative regulator of hedgehog signaling Neighboring gene actin related protein 1A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009259594 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase TRIM8
    Names
    putative E3 ubiquitin-protein ligase TRIM8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM68718v1 Primary Assembly

    Genomic

    1. NW_009259594.1 Reference ASM68718v1 Primary Assembly

      Range
      672549..699797 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009638099.2 → XP_009636394.1  E3 ubiquitin-protein ligase TRIM8

      See identical proteins and their annotated locations for XP_009636394.1

      UniProtKB/TrEMBL
      A0A091J6G7
      Conserved Domains (2) summary
      pfam00643
      Location:13 → 55
      zf-B_box; B-box zinc finger
      cl21478
      Location:58 → 173
      ATP-synt_B; ATP synthase B/B' CF(0)
    Nucleotide Protein
    Heading Accession and Version

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