U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    DCLK1 doublecortin like kinase 1 [ Dryobates pubescens (Downy woodpecker) ]

    Gene ID: 104302333, updated on 10-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    DCLK1
    Gene description
    doublecortin like kinase 1
    Locus tag
    N307_09655
    See related
    EnsemblRapid:ENSPPUG00010017998
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dryobates pubescens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DCLK1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 10 NC_071621.1 (19155283..19407380)
    100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009664468.1 (1445406..1692131)

    Chromosome 10 - NC_071621.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 169 Neighboring gene spartin Neighboring gene neurobeachin Neighboring gene mab-21 like 1 Neighboring gene replication factor C subunit 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axoneme assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in photoreceptor cell development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retina development in camera-type eye IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    serine/threonine-protein kinase DCLK1
    Names
    Serine/threonine-protein kinase DCLK1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bDryPub1.pri

    Genomic

    1. NC_071621.1 Reference bDryPub1.pri

      Range
      19155283..19407380
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054164723.1 → XP_054020698.1  serine/threonine-protein kinase DCLK1 isoform X5

    2. XM_054164721.1 → XP_054020696.1  serine/threonine-protein kinase DCLK1 isoform X2

    3. XM_054164720.1 → XP_054020695.1  serine/threonine-protein kinase DCLK1 isoform X1

    4. XM_054164722.1 → XP_054020697.1  serine/threonine-protein kinase DCLK1 isoform X4

    5. XM_009902835.2 → XP_009901137.1  serine/threonine-protein kinase DCLK1 isoform X3

      See identical proteins and their annotated locations for XP_009901137.1

      UniProtKB/TrEMBL
      A0A093GIQ2
      Related
      ENSPPUP00010017165.1, ENSPPUT00010028333.1
      Conserved Domains (1) summary
      cd14183
      Location:76 → 343
      STKc_DCKL1; Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called Doublecortin-like and CAM kinase-like 1)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.