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    LOC105376709 uncharacterized LOC105376709 [ Homo sapiens (human) ]

    Gene ID: 105376709, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC105376709
    Gene description
    uncharacterized LOC105376709
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.5) See more
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    Genomic context

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    See LOC105376709 in Genome Data Viewer
    Location:
    15q13.3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (32356351..32358631, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (30151050..30153330, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724078 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:32584971-32585470 Neighboring gene RNA, U6 small nuclear 18, pseudogene Neighboring gene hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:32644691-32645237 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:32645238-32645783 Neighboring gene uncharacterized LOC112268159 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:32679479-32679978 Neighboring gene dynamin 1 pseudogene 31

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      32356351..32358631 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007064572.1 RNA Sequence

    2. XR_932069.4 RNA Sequence

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_012132920.1 Reference GRCh38.p14 PATCHES

      Range
      168981..171261
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007068964.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      30151050..30153330 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007085843.1 RNA Sequence

    2. XR_007085842.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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