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    LOC106104249 endochitinase [ Papilio polytes (common Mormon) ]

    Gene ID: 106104249, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC106104249
    Gene description
    endochitinase
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Papilio polytes
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Papilionidae; Papilioninae; Papilio
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC106104249 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current Ppol_1.0 (GCF_000836215.1) Unplaced Scaffold NW_013525513.1 (422775..441130, complement)

    NW_013525513.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106104325 Neighboring gene dopamine receptor 2 Neighboring gene uncharacterized LOC106104179 Neighboring gene aurora kinase C-like Neighboring gene hydroxypyruvate isomerase-like protein Gip

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_013525513.1 Unplaced Scaffold Reference Ppol_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comprehensive microarray-based analysis for stage-specific larval camouflage pattern-associated genes in the swallowtail butterfly, Papilio xuthus. Futahashi R, et al. BMC Biol, 2012 May 31. PMID 22651552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chitin catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endochitinase
    Names
    chitinase 5
    XP_013139686.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001311673.1 → NP_001298602.1  endochitinase precursor

      Status: PROVISIONAL

      Source sequence(s)
      AK402304
      UniProtKB/TrEMBL
      I4DLY6
      Conserved Domains (3) summary
      smart00494
      Location:491 → 538
      ChtBD2; Chitin-binding domain type 2
      smart00636
      Location:25 → 376
      Glyco_18; Glyco_18 domain
      cl10447
      Location:26 → 396
      GH18_chitinase-like; The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have ...

    RefSeqs of Annotated Genomes: Papilio polytes Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ppol_1.0 Primary Assembly

    Genomic

    1. NW_013525513.1 Reference Ppol_1.0 Primary Assembly

      Range
      422775..441130 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013284232.1 → XP_013139686.1  endochitinase

      UniProtKB/TrEMBL
      I4DLY6
      Conserved Domains (3) summary
      smart00494
      Location:491 → 538
      ChtBD2; Chitin-binding domain type 2
      smart00636
      Location:25 → 376
      Glyco_18; Glyco_18 domain
      cl10447
      Location:26 → 396
      GH18_chitinase-like; The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases