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    LOC106666490 protein white [ Cimex lectularius (bed bug) ]

    Gene ID: 106666490, updated on 28-Mar-2024

    Summary

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    Gene symbol
    LOC106666490
    Gene description
    protein white
    See related
    VectorBase:LOC106666490; EnsemblRapid:LOC106666490
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Cimex lectularius
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Cimicidae; Cimex
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    Genomic context

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    See LOC106666490 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    101 current Clec_2.1 (GCF_000648675.2) Unplaced Scaffold NW_019392718.1 (446063..464729, complement)
    100 previous assembly Clec_1.0 (GCF_000648675.1) Unplaced Scaffold NW_014465016.1 (6191817..6210433, complement)

    NW_019392718.1Genomic Context describing neighboring genes Neighboring gene histone deacetylase 4 Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene uncharacterized LOC106666821 Neighboring gene mitochondrial ribosomal protein S18C Neighboring gene eye pigment precursor family transporter white

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: ABC transporter G family member 37-like; protein white
    Names
    ABC transporter G family member 37-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001416544.1 → NP_001403473.1  protein white

      Status: VALIDATED

      Source sequence(s)
      JHUN02000476

    RefSeqs of Annotated Genomes: Cimex lectularius Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clec_2.1 Primary Assembly

    Genomic

    1. NW_019392718.1 Reference Clec_2.1 Primary Assembly

      Range
      446063..464729 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024226596.1 → XP_024082364.1  LOW QUALITY PROTEIN: ABC transporter G family member 37-like

      Related
      XP_024082364.1, XM_024226596.1
      Conserved Domains (1) summary
      TIGR00955
      Location:52 → 675
      3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases