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    SORBS1 sorbin and SH3 domain containing 1 [ Acinonyx jubatus (cheetah) ]

    Gene ID: 106984799, updated on 10-Oct-2024

    Summary

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    Gene symbol
    SORBS1
    Gene description
    sorbin and SH3 domain containing 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acinonyx jubatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
    Orthologs
    human mouse all
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    Genomic context

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    See SORBS1 in Genome Data Viewer
    Location:
    chromosome: D2
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) D2 NC_069393.1 (53305547..53535549, complement)

    Chromosome D2 - NC_069393.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 2C21 Neighboring gene coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like Neighboring gene PDZ and LIM domain 1 Neighboring gene uncharacterized LOC113600242 Neighboring gene uncharacterized LOC128312732 Neighboring gene cytochrome c oxidase subunit 1-like Neighboring gene U6 spliceosomal RNA Neighboring gene aldehyde dehydrogenase 18 family member A1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_069393.1 Chromosome D2 Reference VMU_Ajub_asm_v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-substrate adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-substrate junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorbin and SH3 domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference VMU_Ajub_asm_v1.0

    Genomic

    1. NC_069393.1 Reference VMU_Ajub_asm_v1.0

      Range
      53305547..53535549 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_053207922.1 → XP_053063897.1  sorbin and SH3 domain-containing protein 1 isoform X6

    2. XM_053207918.1 → XP_053063893.1  sorbin and SH3 domain-containing protein 1 isoform X2

    3. XM_053207919.1 → XP_053063894.1  sorbin and SH3 domain-containing protein 1 isoform X3

    4. XM_053207926.1 → XP_053063901.1  sorbin and SH3 domain-containing protein 1 isoform X10

    5. XM_053207920.1 → XP_053063895.1  sorbin and SH3 domain-containing protein 1 isoform X4

    6. XM_053207928.1 → XP_053063903.1  sorbin and SH3 domain-containing protein 1 isoform X11

    7. XM_053207923.1 → XP_053063898.1  sorbin and SH3 domain-containing protein 1 isoform X7

    8. XM_053207929.1 → XP_053063904.1  sorbin and SH3 domain-containing protein 1 isoform X12

    9. XM_053207925.1 → XP_053063900.1  sorbin and SH3 domain-containing protein 1 isoform X9

    10. XM_053207917.1 → XP_053063892.1  sorbin and SH3 domain-containing protein 1 isoform X1

    11. XM_053207921.1 → XP_053063896.1  sorbin and SH3 domain-containing protein 1 isoform X5

    12. XM_053207924.1 → XP_053063899.1  sorbin and SH3 domain-containing protein 1 isoform X8

    13. XM_053207934.1 → XP_053063909.1  sorbin and SH3 domain-containing protein 1 isoform X19

    14. XM_053207932.1 → XP_053063907.1  sorbin and SH3 domain-containing protein 1 isoform X15

    15. XM_053207933.1 → XP_053063908.1  sorbin and SH3 domain-containing protein 1 isoform X18

    16. XM_027062685.2 → XP_026918486.1  sorbin and SH3 domain-containing protein 1 isoform X17

      UniProtKB/TrEMBL
      A0A6J1ZM78
      Conserved Domains (4) summary
      cd11916
      Location:1206 → 1264
      SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11919
      Location:749 → 803
      SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11922
      Location:823 → 880
      SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      pfam02208
      Location:370 → 410
      Sorb; Sorbin homologous domain

    17. XM_027062683.2 → XP_026918484.1  sorbin and SH3 domain-containing protein 1 isoform X16

      UniProtKB/TrEMBL
      A0A6J1ZPB7, A0A6J1ZQL4
      Conserved Domains (4) summary
      cd11916
      Location:1232 → 1290
      SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11919
      Location:795 → 849
      SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11922
      Location:869 → 926
      SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      pfam02208
      Location:370 → 407
      Sorb; Sorbin homologous domain

    18. XM_053207931.1 → XP_053063906.1  sorbin and SH3 domain-containing protein 1 isoform X14

    19. XM_053207941.1 → XP_053063916.1  sorbin and SH3 domain-containing protein 1 isoform X26

    20. XM_053207930.1 → XP_053063905.1  sorbin and SH3 domain-containing protein 1 isoform X13

    21. XM_053207939.1 → XP_053063914.1  sorbin and SH3 domain-containing protein 1 isoform X24

    22. XM_053207938.1 → XP_053063913.1  sorbin and SH3 domain-containing protein 1 isoform X23

    23. XM_053207937.1 → XP_053063912.1  sorbin and SH3 domain-containing protein 1 isoform X22

    24. XM_053207936.1 → XP_053063911.1  sorbin and SH3 domain-containing protein 1 isoform X21

    25. XM_053207935.1 → XP_053063910.1  sorbin and SH3 domain-containing protein 1 isoform X20

    26. XM_027062688.2 → XP_026918489.1  sorbin and SH3 domain-containing protein 1 isoform X27

      UniProtKB/TrEMBL
      A0A6J1ZN09, A0A6J1ZPC2
      Conserved Domains (5) summary
      cd11916
      Location:944 → 1002
      SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11919
      Location:765 → 819
      SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11922
      Location:839 → 896
      SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cl02617
      Location:361 → 398
      Sorb; Sorbin homologous domain
      cl26464
      Location:56 → 300
      Atrophin-1; Atrophin-1 family

    27. XM_053207951.1 → XP_053063926.1  sorbin and SH3 domain-containing protein 1 isoform X39

    28. XM_053207942.1 → XP_053063917.1  sorbin and SH3 domain-containing protein 1 isoform X28

    29. XM_053207940.1 → XP_053063915.1  sorbin and SH3 domain-containing protein 1 isoform X25

    30. XM_027062691.2 → XP_026918492.1  sorbin and SH3 domain-containing protein 1 isoform X34

      UniProtKB/TrEMBL
      A0A6J1ZLW9, A0A6J1ZN09
      Conserved Domains (4) summary
      cd11916
      Location:788 → 846
      SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11919
      Location:609 → 663
      SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11922
      Location:683 → 740
      SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cl02617
      Location:240 → 280
      Sorb; Sorbin homologous domain

    31. XM_053207944.1 → XP_053063919.1  sorbin and SH3 domain-containing protein 1 isoform X30

    32. XM_027062693.2 → XP_026918494.1  sorbin and SH3 domain-containing protein 1 isoform X35

      UniProtKB/TrEMBL
      A0A6J1ZN09, A0A6J1ZPC7
      Conserved Domains (4) summary
      smart00459
      Location:246 → 290
      Sorb; Sorbin homologous domain
      cd11916
      Location:785 → 843
      SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11919
      Location:606 → 660
      SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11922
      Location:680 → 737
      SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin

    33. XM_053207947.1 → XP_053063922.1  sorbin and SH3 domain-containing protein 1 isoform X33

    34. XM_053207948.1 → XP_053063923.1  sorbin and SH3 domain-containing protein 1 isoform X36

    35. XM_053207946.1 → XP_053063921.1  sorbin and SH3 domain-containing protein 1 isoform X32

    36. XM_053207945.1 → XP_053063920.1  sorbin and SH3 domain-containing protein 1 isoform X31

    37. XM_053207943.1 → XP_053063918.1  sorbin and SH3 domain-containing protein 1 isoform X29

    38. XM_053207949.1 → XP_053063924.1  sorbin and SH3 domain-containing protein 1 isoform X37

    39. XM_053207950.1 → XP_053063925.1  sorbin and SH3 domain-containing protein 1 isoform X38

    40. XM_053207952.1 → XP_053063927.1  sorbin and SH3 domain-containing protein 1 isoform X40

    41. XM_053207960.1 → XP_053063935.1  sorbin and SH3 domain-containing protein 1 isoform X48

    42. XM_053207962.1 → XP_053063937.1  sorbin and SH3 domain-containing protein 1 isoform X50

    43. XM_053207961.1 → XP_053063936.1  sorbin and SH3 domain-containing protein 1 isoform X49

    44. XM_053207953.1 → XP_053063928.1  sorbin and SH3 domain-containing protein 1 isoform X41

    45. XM_053207955.1 → XP_053063930.1  sorbin and SH3 domain-containing protein 1 isoform X43

    46. XM_053207954.1 → XP_053063929.1  sorbin and SH3 domain-containing protein 1 isoform X42

    47. XM_053207956.1 → XP_053063931.1  sorbin and SH3 domain-containing protein 1 isoform X44

    48. XM_027062699.2 → XP_026918500.1  sorbin and SH3 domain-containing protein 1 isoform X45

      UniProtKB/TrEMBL
      A0A6J1ZPD5, A0A6J1ZQN2
      Conserved Domains (5) summary
      cd11916
      Location:753 → 811
      SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11919
      Location:574 → 628
      SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      cd11922
      Location:648 → 705
      SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
      pfam02208
      Location:217 → 257
      Sorb; Sorbin homologous domain
      pfam15773
      Location:21 → 199
      DUF4701; Domain of unknown function (DUF4701)

    49. XM_053207959.1 → XP_053063934.1  sorbin and SH3 domain-containing protein 1 isoform X47

    50. XM_053207958.1 → XP_053063933.1  sorbin and SH3 domain-containing protein 1 isoform X46

    Nucleotide Protein
    Heading Accession and Version

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