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    LOC107920688 (+)-delta-cadinene synthase isozyme XC1 [ Gossypium hirsutum (cotton) ]

    Gene ID: 107920688, updated on 12-Aug-2024

    Summary

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    Gene symbol
    LOC107920688
    Gene description
    (+)-delta-cadinene synthase isozyme XC1
    Locus tag
    ERO13_A04G023800v2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gossypium hirsutum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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    Genomic context

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    See LOC107920688 in Genome Data Viewer
    Location:
    chromosome: A04
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A04 NC_053427.1 (4145368..4148387)

    Chromosome A04 - NC_053427.1Genomic Context describing neighboring genes Neighboring gene (+)-delta-cadinene synthase isozyme XC14 Neighboring gene (+)-delta-cadinene synthase isozyme C2 Neighboring gene uncharacterized LOC121227869 Neighboring gene (+)-delta-cadinene synthase isozyme XC14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053427.1 Chromosome A04 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables terpene synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in diterpenoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    (+)-delta-cadinene synthase isozyme XC1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Genomic

    1. NC_053427.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

      Range
      4145368..4148387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016850504.1 → XP_016705993.1  (+)-delta-cadinene synthase isozyme XC1

      UniProtKB/TrEMBL
      A0A1U8KU68, A0A1U8KY71
      Conserved Domains (1) summary
      cd00684
      Location:22 → 551
      Terpene_cyclase_plant_C1; Plant Terpene Cyclases, Class 1
    Nucleotide Protein
    Heading Accession and Version

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