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    sun1.S Sad1 and UNC84 domain containing 1 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 108703140, updated on 4-Nov-2024

    Summary

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    Official Symbol
    sun1.S
    Official Full Name
    Sad1 and UNC84 domain containing 1 S homeolog
    Primary source
    Xenbase:XB-GENE-17337189
    Locus tag
    XELAEV_18047583mg
    See related
    EnsemblRapid:ENSXLAG00005008785 AllianceGenome:Xenbase:XB-GENE-17337189
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    unc84a
    Summary
    Predicted to enable protein-membrane adaptor activity. Predicted to be located in membrane and nuclear envelope. Predicted to be part of meiotic nuclear membrane microtubule tethering complex. Orthologous to human SUN1 (Sad1 and UNC84 domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See sun1.S in Genome Data Viewer
    Location:
    chromosome: 9_10S
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (94239957..94280628, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (87583804..87624627, complement)

    Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly protein COX19 Neighboring gene ArfGAP with dual PH domains 1 S homeolog Neighboring gene golgi to ER traffic protein 4 S homeolog Neighboring gene uncharacterized XB5721655 S homeolog Neighboring gene dynein, axonemal, assembly factor 5 S homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables protein-membrane adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of meiotic nuclear membrane microtubule tethering complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SUN domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      94239957..94280628 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018239152.2 → XP_018094641.1  SUN domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A1L8EQC6, A0A974BVI0

    2. XM_018239155.2 → XP_018094644.1  SUN domain-containing protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8J0TTR0
      Related
      ENSXLAP00005025671.1, ENSXLAT00005026383.1

    3. XM_018239153.2 → XP_018094642.1  SUN domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A1L8EQC6, A0A974BVI0
      Related
      ENSXLAP00005025521.1, ENSXLAT00005026232.1

    4. XM_041579276.1 → XP_041435210.1  SUN domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J1M2F2

    5. XM_041579277.1 → XP_041435211.1  SUN domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8J1M1L6
      Related
      ENSXLAP00005025570.1, ENSXLAT00005026281.1

    6. XM_018239159.2 → XP_018094648.1  SUN domain-containing protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8J0U110
      Related
      ENSXLAP00005025535.1, ENSXLAT00005026248.1

    7. XM_041579278.1 → XP_041435212.1  SUN domain-containing protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A8J1M0G8
      Related
      ENSXLAP00005025621.1, ENSXLAT00005026334.1
      Conserved Domains (2) summary
      pfam07738
      Location:766 → 900
      Sad1_UNC; Sad1 / UNC-like C-terminal
      pfam09387
      Location:127 → 200
      MRP; Mitochondrial RNA binding protein MRP

    8. XM_018239154.2 → XP_018094643.1  SUN domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A1L8EQC6, A0A974BVI0
      Related
      ENSXLAP00005025596.1, ENSXLAT00005026307.1
    Nucleotide Protein Strain
    Heading Accession and Version

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