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    ChLD3 Chitin and LDLR binding deacetylase 3 [ Trachymyrmex zeteki ]

    Gene ID: 108731055, updated on 10-Oct-2024

    Summary

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    Gene symbol
    ChLD3
    Gene description
    Chitin and LDLR binding deacetylase 3
    Locus tag
    ALC60_14831
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Trachymyrmex zeteki
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Trachymyrmex
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See ChLD3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Tzet1.0 (GCF_001594055.1) Unplaced Scaffold NW_017258032.1 (108405..115624, complement)

    NW_017258032.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108731050 Neighboring gene U6 snRNA-associated Sm-like protein LSm7 Neighboring gene Sarcoplasmic calcium-binding protein 1 Neighboring gene Niemann-Pick type C-1a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017258032.1 Unplaced Scaffold Reference Tzet1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC108731055

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Trachymyrmex zeteki Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tzet1.0

    Genomic

    1. NW_017258032.1 Reference Tzet1.0

      Range
      108405..115624 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018461110.1 → XP_018316612.1  uncharacterized protein LOC108731055

    Nucleotide Protein
    Heading Accession and Version

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