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    LOC108924969 transcription factor TFIIIB component B'' homolog [ Scleropages formosus (Asian bonytongue) ]

    Gene ID: 108924969, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC108924969
    Gene description
    transcription factor TFIIIB component B'' homolog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Scleropages formosus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
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    Genomic context

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    See LOC108924969 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    101 current fSclFor1.1 (GCF_900964775.1) 6 NC_041811.1 (20883885..20905792)
    100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371558.1 (4662283..4673645)

    Chromosome 6 - NC_041811.1Genomic Context describing neighboring genes Neighboring gene DAB adaptor protein 2 Neighboring gene uncharacterized LOC108925050 Neighboring gene transcription factor TFIIIB component B'' homolog Neighboring gene transcription factor TFIIIB component B'' homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables TFIIIC-class transcription factor complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA polymerase III preinitiation complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIIIB complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: transcription factor TFIIIB component B'' homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSclFor1.1 Primary Assembly

    Genomic

    1. NC_041811.1 Reference fSclFor1.1 Primary Assembly

      Range
      20883885..20905792
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029253062.1 → XP_029108895.1  LOW QUALITY PROTEIN: transcription factor TFIIIB component B'' homolog

      Conserved Domains (2) summary
      COG5118
      Location:365 → 559
      BDP1; Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
      pfam15963
      Location:440 → 520
      Myb_DNA-bind_7; Myb DNA-binding like
    Nucleotide Protein
    Heading Accession and Version

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