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    kctd12b potassium channel tetramerisation domain containing 12b [ Scleropages formosus (Asian bonytongue) ]

    Gene ID: 108925200, updated on 14-Mar-2024

    Summary

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    Gene symbol
    kctd12b
    Gene description
    potassium channel tetramerisation domain containing 12b
    See related
    Ensembl:ENSSFOG00015010721
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Scleropages formosus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
    Orthologs
    zebrafish all
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    Genomic context

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    See kctd12b in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current fSclFor1.1 (GCF_900964775.1) 13 NC_041818.1 (6275630..6298480)
    100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371561.1 (7364655..7387121, complement)

    Chromosome 13 - NC_041818.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 711 Neighboring gene exocyst complex component 1-like Neighboring gene rho-related GTP-binding protein RhoG-like Neighboring gene FH2 domain containing 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein KCTD8-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSclFor1.1 Primary Assembly

    Genomic

    1. NC_041818.1 Reference fSclFor1.1 Primary Assembly

      Range
      6275630..6298480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029257654.1 → XP_029113487.1  BTB/POZ domain-containing protein KCTD8-like isoform X1

      UniProtKB/TrEMBL
      A0A8C9V224
      Related
      ENSSFOP00015016606.2, ENSSFOT00015016795.2
      Conserved Domains (1) summary
      cd18367
      Location:17 → 116
      BTB_POZ_KCTD8-like; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing proteins, KCTD8, KCTD12, KCTD16 and similar proteins

    2. XM_029257652.1 → XP_029113485.1  BTB/POZ domain-containing protein KCTD8-like isoform X1

      UniProtKB/TrEMBL
      A0A8C9V224
      Conserved Domains (1) summary
      cd18367
      Location:17 → 116
      BTB_POZ_KCTD8-like; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing proteins, KCTD8, KCTD12, KCTD16 and similar proteins

    3. XM_029257653.1 → XP_029113486.1  BTB/POZ domain-containing protein KCTD8-like isoform X1

      UniProtKB/TrEMBL
      A0A8C9V224
      Conserved Domains (1) summary
      cd18367
      Location:17 → 116
      BTB_POZ_KCTD8-like; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing proteins, KCTD8, KCTD12, KCTD16 and similar proteins

    4. XM_029257651.1 → XP_029113484.1  BTB/POZ domain-containing protein KCTD8-like isoform X1

      UniProtKB/TrEMBL
      A0A8C9V224
      Conserved Domains (1) summary
      cd18367
      Location:17 → 116
      BTB_POZ_KCTD8-like; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing proteins, KCTD8, KCTD12, KCTD16 and similar proteins

    5. XM_018737001.2 → XP_018592517.1  BTB/POZ domain-containing protein KCTD8-like isoform X2

      UniProtKB/TrEMBL
      A0A0P7UY06
    Nucleotide Protein
    Heading Accession and Version

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