U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC109064588 interferon-induced, double-stranded RNA-activated protein kinase-like [ Cyprinus carpio (common carp) ]

    Gene ID: 109064588, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC109064588
    Gene description
    interferon-induced, double-stranded RNA-activated protein kinase-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cyprinus carpio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
    Also known as
    PKR
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC109064588 in Genome Data Viewer
    Location:
    chromosome: A13
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    101 current ASM1834038v1 (GCF_018340385.1) A13 NC_056584.1 (27221407..27230814, complement)
    100 previous assembly common carp genome (GCF_000951615.1) 7 NC_031703.1 (7709522..7786663)

    Chromosome A13 - NC_056584.1Genomic Context describing neighboring genes Neighboring gene cancer-related nucleoside-triphosphatase-like Neighboring gene eukaryotic translation initiation factor 2-alpha kinase 3-like Neighboring gene G patch domain containing 11 Neighboring gene myopalladin-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    interferon-induced, double-stranded RNA-activated protein kinase-like
    Names
    interferon induced double-stranded RNA activated protein kinase
    interferon-induced double-standed RNA-activated protein kinase transcript

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1834038v1 Primary Assembly

    Genomic

    1. NC_056584.1 Reference ASM1834038v1 Primary Assembly

      Range
      27221407..27230814 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042769548.1 → XP_042625482.1  interferon-induced, double-stranded RNA-activated protein kinase-like

      UniProtKB/TrEMBL
      A0A9J8B3Q9, A0A9Q9YSA7
      Conserved Domains (3) summary
      cd19903
      Location:212 → 278
      DSRM_EIF2AK2_rpt1; first double-stranded RNA binding motif of eukaryotic translation initiation factor 2-alpha kinase 2 (EIF2AK2) and similar proteins
      cd20314
      Location:99 → 167
      DSRM_EIF2AK2; double-stranded RNA binding motif of eukaryotic translation initiation factor 2-alpha kinase 2 (EIF2AK2) and similar proteins
      cl21453
      Location:393 → 669
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases