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    ACKR1 atypical chemokine receptor 1 (Duffy blood group) [ Bos indicus (zebu cattle) ]

    Gene ID: 109578886, updated on 14-Mar-2024

    Summary

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    Gene symbol
    ACKR1
    Gene description
    atypical chemokine receptor 1 (Duffy blood group)
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos indicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    FY; DARC; Duffy
    Orthologs
    human mouse all
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    Genomic context

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    See ACKR1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Bos_indicus_1.0 (GCF_000247795.1) 3 NC_032652.1 (11498176..11501081, complement)

    Chromosome 3 - NC_032652.1Genomic Context describing neighboring genes Neighboring gene mucosal pentraxin Neighboring gene GTP-binding nuclear protein Ran-like Neighboring gene cell adhesion molecule 3 Neighboring gene transfer RNA arginine (anticodon UCU)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_032652.1 Chromosome 3 Reference Bos_indicus_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables C-C chemokine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemokine-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of chemokine production IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    atypical chemokine receptor 1
    Names
    Duffy blood group chemokine receptor
    duffy antigen/chemokine receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bos_indicus_1.0 Primary Assembly

    Genomic

    1. NC_032652.1 Reference Bos_indicus_1.0 Primary Assembly

      Range
      11498176..11501081 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019988410.1 → XP_019843969.1  atypical chemokine receptor 1

      UniProtKB/TrEMBL
      A0A6P5E0W6
      Conserved Domains (1) summary
      cd15010
      Location:251 → 507
      7tmA_ACKR1_DARC; Duffy antigen receptor for chemokines, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q863H8.1 GenPept UniProtKB/Swiss-Prot:Q863H8

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