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    MAFA MAF bZIP transcription factor A [ Lonchura striata (white-rumped munia) ]

    Gene ID: 110475164, updated on 2-Oct-2024

    Summary

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    Gene symbol
    MAFA
    Gene description
    MAF bZIP transcription factor A
    Locus tag
    RLOC_00006826
    See related
    Ensembl:ENSLSDG00000013695
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lonchura striata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
    Orthologs
    human mouse all
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    Genomic context

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    See MAFA in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_09 current lonStrDom2 (GCF_005870125.1) 2 NC_042567.1 (146536895..146539235)

    Chromosome 2 - NC_042567.1Genomic Context describing neighboring genes Neighboring gene 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 Neighboring gene zinc finger CCCH-type containing 3 Neighboring gene rhophilin Rho GTPase binding protein 1 Neighboring gene DNA topoisomerase I mitochondrial

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_042567.1 Chromosome 2 Reference lonStrDom2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in insulin secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to glucose IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor MafA
    Names
    Transcription factor MafA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference lonStrDom2 Primary Assembly

    Genomic

    1. NC_042567.1 Reference lonStrDom2 Primary Assembly

      Range
      146536895..146539235
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021539088.1 → XP_021394763.1  transcription factor MafA

      Related
      ENSLSDP00000019198.1, ENSLSDT00000021752.1
      Conserved Domains (2) summary
      cd14718
      Location:198 → 267
      bZIP_Maf_large; Basic leucine zipper (bZIP) domain of large musculoaponeurotic fibrosarcoma (Maf) proteins: a DNA-binding and dimerization domain
      pfam08383
      Location:93 → 126
      Maf_N; Maf N-terminal region
    Nucleotide Protein
    Heading Accession and Version

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