U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    TNFAIP3 TNF alpha induced protein 3 [ Lonchura striata domestica (Bengalese finch) ]

    Gene ID: 110483298, updated on 15-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TNFAIP3
    Gene description
    TNF alpha induced protein 3
    Locus tag
    RLOC_00005644
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lonchura striata domestica (sub-species: domestica)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TNFAIP3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current lonStrDom2 (GCF_005870125.1) 3 NC_042568.1 (49850410..49865427)
    100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657519.1 (1540798..1555815)

    Chromosome 3 - NC_042568.1Genomic Context describing neighboring genes Neighboring gene oligodendrocyte transcription factor 3 Neighboring gene uncharacterized LOC116183472 Neighboring gene p53 apoptosis effector related to PMP-22 Neighboring gene p53 apoptosis effector related to PMP22

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables K63-linked polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K29-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K33-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein deubiquitination involved in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tumor necrosis factor alpha-induced protein 3
    Names
    Tumor necrosis factor alpha-induced protein 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference lonStrDom2 Primary Assembly

    Genomic

    1. NC_042568.1 Reference lonStrDom2 Primary Assembly

      Range
      49850410..49865427
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031504534.1 → XP_031360394.1  tumor necrosis factor alpha-induced protein 3

      Conserved Domains (2) summary
      smart00259
      Location:773 → 798
      ZnF_A20; A20-like zinc fingers
      pfam02338
      Location:99 → 258
      OTU; OTU-like cysteine protease
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.