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    LOC110812313 metallothionein-like protein type 3 [ Carica papaya (papaya) ]

    Gene ID: 110812313, updated on 31-Jan-2024

    Summary

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    Gene symbol
    LOC110812313
    Gene description
    metallothionein-like protein type 3
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Carica papaya
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
    Also known as
    MT-3
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    Genomic context

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    See LOC110812313 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Papaya1.0 (GCF_000150535.2) Unplaced Scaffold NW_019014612.1 (478401..479713)

    NW_019014612.1Genomic Context describing neighboring genes Neighboring gene NEP1-interacting protein 2-like Neighboring gene pheromone-processing carboxypeptidase KEX1 Neighboring gene uncharacterized LOC110812246 Neighboring gene cytochrome c oxidase copper chaperone 1 Neighboring gene uncharacterized LOC110812288

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019014612 Unplaced Scaffold Reference Papaya1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The electronic Plant Gene Register. . Plant Physiol, 1996 Dec. PMID 8972607, Free PMC Article
    2. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Ming R, et al. Nature, 2008 Apr 24. PMID 18432245, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular copper ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    metallothionein-like protein type 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001426513.1 → NP_001413442.1  metallothionein-like protein type 3

      Status: VALIDATED

      Source sequence(s)
      AM903791, EX282015, EX287572
      UniProtKB/Swiss-Prot
      Q96386
      UniProtKB/TrEMBL
      G8FMJ0

    RefSeqs of Annotated Genomes: Carica papaya Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Papaya1.0 Primary Assembly

    Genomic

    1. NW_019014612.1 Reference Papaya1.0 Primary Assembly

      Range
      478401..479713
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022039061.1 → XP_021894753.1  metallothionein-like protein type 3

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q96386.1 GenPept UniProtKB/Swiss-Prot:Q96386

    Gene LinkOut

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