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    LOC111027267 protein lozenge-like [ Myzus persicae (green peach aphid) ]

    Gene ID: 111027267, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC111027267
    Gene description
    protein lozenge-like
    See related
    EnsemblRapid:LOC111027267
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Myzus persicae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Myzus
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    Genomic context

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    See LOC111027267 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current MPER_G0061.0 (GCF_001856785.1) Unplaced Scaffold NW_019100482.1 (159376..208619)

    NW_019100482.1Genomic Context describing neighboring genes Neighboring gene GTP-binding protein Rheb homolog Neighboring gene GTP-binding protein Rheb homolog Neighboring gene uncharacterized LOC111027068 Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene transfer RNA glycine (anticodon GCC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019100482 Unplaced Scaffold Reference MPER_G0061.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein lozenge-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Myzus persicae Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MPER_G0061.0 Primary Assembly

    Genomic

    1. NW_019100482.1 Reference MPER_G0061.0 Primary Assembly

      Range
      159376..208619
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022305570.1 → XP_022161262.1  protein lozenge-like isoform X1

      Related
      XP_022161262.1, XM_022305570.1
      Conserved Domains (1) summary
      pfam00853
      Location:57 → 178
      Runt; Runt domain

    2. XM_022305580.1 → XP_022161272.1  protein lozenge-like isoform X2

      Related
      XP_022161272.1, XM_022305580.1
      Conserved Domains (1) summary
      pfam00853
      Location:57 → 178
      Runt; Runt domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases