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    LOC112225844 gamma-crystallin M3-like [ Oncorhynchus tshawytscha (Chinook salmon) ]

    Gene ID: 112225844, updated on 18-Jun-2024

    Summary

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    Gene symbol
    LOC112225844
    Gene description
    gamma-crystallin M3-like
    See related
    Ensembl:ENSOTSG00005055834
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus tshawytscha
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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    Genomic context

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    See LOC112225844 in Genome Data Viewer
    Location:
    chromosome: LG09
    Exon count:
    3
    Annotation release Status Assembly LG Location
    101 current Otsh_v2.0 (GCF_018296145.1) LG09 NC_056437.1 (78230092..78231033, complement)
    100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 27 NC_037123.1 (10528027..10529482, complement)

    Linkage Group LG09 - NC_056437.1Genomic Context describing neighboring genes Neighboring gene zinc finger BED domain-containing protein 4 Neighboring gene gamma-crystallin M3-like Neighboring gene gamma-crystallin M3-like Neighboring gene gamma-crystallin M3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of eye lens IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lens development in camera-type eye IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in visual perception IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma-crystallin M3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Otsh_v2.0 Primary Assembly

    Genomic

    1. NC_056437.1 Reference Otsh_v2.0 Primary Assembly

      Range
      78230092..78231033 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042327932.1 → XP_042183866.1  gamma-crystallin M3-like

      UniProtKB/TrEMBL
      A0A8C8GWA5
      Related
      ENSOTSP00005002989.2, ENSOTST00005003338.2
      Conserved Domains (1) summary
      smart00247
      Location:95 → 176
      XTALbg; Beta/gamma crystallins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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