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    LOC112240956 dentin sialophosphoprotein-like [ Oncorhynchus tshawytscha (Chinook salmon) ]

    Gene ID: 112240956, updated on 18-Jun-2024

    Summary

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    Gene symbol
    LOC112240956
    Gene description
    dentin sialophosphoprotein-like
    See related
    Ensembl:ENSOTSG00005076532
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus tshawytscha
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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    Genomic context

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    See LOC112240956 in Genome Data Viewer
    Location:
    chromosome: LG15
    Exon count:
    3
    Annotation release Status Assembly LG Location
    101 current Otsh_v2.0 (GCF_018296145.1) LG15 NC_056443.1 (39660316..39663238, complement)
    100 previous assembly Otsh_v1.0 (GCF_002872995.1) Unplaced Scaffold NW_020131015.1 (15518..18341, complement)

    Linkage Group LG15 - NC_056443.1Genomic Context describing neighboring genes Neighboring gene transferrin receptor 2 Neighboring gene uncharacterized LOC112240955 Neighboring gene uncharacterized LOC112239509 Neighboring gene uncharacterized LOC121839436

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables collagen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dentinogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in odontoblast differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dentin sialophosphoprotein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Otsh_v2.0 Primary Assembly

    Genomic

    1. NC_056443.1 Reference Otsh_v2.0 Primary Assembly

      Range
      39660316..39663238 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024409162.2 → XP_024264930.2  dentin sialophosphoprotein-like

      Related
      ENSOTST00005124737.1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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