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    DCLK1 doublecortin like kinase 1 [ Nothoprocta perdicaria ]

    Gene ID: 112942875, updated on 15-Mar-2024

    Summary

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    Gene symbol
    DCLK1
    Gene description
    doublecortin like kinase 1
    See related
    Ensembl:ENSNPEG00000015878
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nothoprocta perdicaria
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
    Orthologs
    human mouse all
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    Genomic context

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    See DCLK1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020454505.1 (974277..1202837)

    NW_020454505.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 169-like Neighboring gene spartin Neighboring gene neurobeachin Neighboring gene mab-21 like 1 Neighboring gene probable tRNA methyltransferase 9B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020454505 Unplaced Scaffold Reference notPer1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axoneme assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in photoreceptor cell development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retina development in camera-type eye IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase DCLK1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference notPer1

    Genomic

    1. NW_020454505.1 Reference notPer1

      Range
      974277..1202837
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026033900.1 → XP_025889685.1  serine/threonine-protein kinase DCLK1 isoform X2

      UniProtKB/TrEMBL
      A0A8C6ZVX7
      Conserved Domains (2) summary
      smart00537
      Location:52 → 142
      DCX; Domain in the Doublecortin (DCX) gene product
      cd14183
      Location:406 → 673
      STKc_DCKL1; Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called Doublecortin-like and CAM kinase-like 1)

    2. XM_026033899.1 → XP_025889684.1  serine/threonine-protein kinase DCLK1 isoform X1

      UniProtKB/TrEMBL
      A0A8C7EI51
      Conserved Domains (2) summary
      smart00537
      Location:52 → 142
      DCX; Domain in the Doublecortin (DCX) gene product
      cd14183
      Location:406 → 673
      STKc_DCKL1; Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called Doublecortin-like and CAM kinase-like 1)

    3. XM_026033902.1 → XP_025889687.1  serine/threonine-protein kinase DCLK1 isoform X4

      UniProtKB/TrEMBL
      A0A8C6ZVX7
      Related
      ENSNPEP00000021574.1, ENSNPET00000022127.1
      Conserved Domains (2) summary
      smart00537
      Location:52 → 142
      DCX; Domain in the Doublecortin (DCX) gene product
      cd14183
      Location:383 → 650
      STKc_DCKL1; Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called Doublecortin-like and CAM kinase-like 1)

    4. XM_026033901.1 → XP_025889686.1  serine/threonine-protein kinase DCLK1 isoform X3

      UniProtKB/TrEMBL
      A0A8C7EI51
      Related
      ENSNPEP00000021568.1, ENSNPET00000022121.1
      Conserved Domains (2) summary
      smart00537
      Location:52 → 142
      DCX; Domain in the Doublecortin (DCX) gene product
      cd14183
      Location:383 → 650
      STKc_DCKL1; Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called Doublecortin-like and CAM kinase-like 1)

    5. XM_026033904.1 → XP_025889689.1  serine/threonine-protein kinase DCLK1 isoform X6

      Conserved Domains (1) summary
      smart00537
      Location:52 → 142
      DCX; Domain in the Doublecortin (DCX) gene product

    6. XM_026033903.1 → XP_025889688.1  serine/threonine-protein kinase DCLK1 isoform X5

      UniProtKB/TrEMBL
      A0A8C7A429
      Related
      ENSNPEP00000021584.1, ENSNPET00000022137.1
      Conserved Domains (1) summary
      cd14183
      Location:76 → 343
      STKc_DCKL1; Catalytic domain of the Serine/Threonine Kinase, Doublecortin-like kinase 1 (also called Doublecortin-like and CAM kinase-like 1)
    Nucleotide Protein
    Heading Accession and Version

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