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    LOC113063141 ankyrin repeat and SOCS box protein 2-like [ Carassius auratus (goldfish) ]

    Gene ID: 113063141, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC113063141
    Gene description
    ankyrin repeat and SOCS box protein 2-like
    See related
    Ensembl:ENSCARG00000047131
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carassius auratus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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    Genomic context

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    See LOC113063141 in Genome Data Viewer
    Location:
    chromosome: 45
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current ASM336829v1 (GCF_003368295.1) 45 NC_039287.1 (8754557..8761995)

    Chromosome 45 - NC_039287.1Genomic Context describing neighboring genes Neighboring gene glutathione-specific gamma-glutamylcyclotransferase 1-like Neighboring gene chromatin-remodeling ATPase INO80-like Neighboring gene ankyrin repeat and SOCS box protein 2-like Neighboring gene proline-rich membrane anchor 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039287.1 Chromosome 45 Reference ASM336829v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and SOCS box protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM336829v1 Primary Assembly

    Genomic

    1. NC_039287.1 Reference ASM336829v1 Primary Assembly

      Range
      8754557..8761995
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026233335.1 → XP_026089120.1  ankyrin repeat and SOCS box protein 2-like isoform X1

      UniProtKB/TrEMBL
      A0A6P6LX66

    2. XM_026233336.1 → XP_026089121.1  ankyrin repeat and SOCS box protein 2-like isoform X2

      UniProtKB/TrEMBL
      A0A6P6M023
      Related
      ENSCARP00000094226.1, ENSCART00000104268.1
    Nucleotide Protein Strain
    Heading Accession and Version

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