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    LOC113495489 dedicator of cytokinesis protein 1 [ Trichoplusia ni (cabbage looper) ]

    Gene ID: 113495489, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC113495489
    Gene description
    dedicator of cytokinesis protein 1
    See related
    EnsemblRapid:ENSNTCG00000014865
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Trichoplusia ni
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Plusiinae; Trichoplusia
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC113495489 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    38
    Annotation release Status Assembly Chr Location
    100 current tn1 (GCF_003590095.1) 6 NC_039483.1 (5859777..5901907)

    Chromosome 6 - NC_039483.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113494904 Neighboring gene uncharacterized LOC113494696 Neighboring gene sodium-coupled monocarboxylate transporter 1 Neighboring gene uncharacterized LOC113495488 Neighboring gene uncharacterized LOC113495485

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039483.1 Chromosome 6 Reference tn1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dedicator of cytokinesis protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Trichoplusia ni Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference tn1

    Genomic

    1. NC_039483.1 Reference tn1

      Range
      5859777..5901907
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026874268.1 → XP_026730069.1  dedicator of cytokinesis protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A7E5VP45
      Related
      ENSNTCP00000019320.1, ENSNTCT00000023834.1
      Conserved Domains (4) summary
      pfam16172
      Location:88 → 410
      DOCK_N; DOCK N-terminus
      cl06123
      Location:1282 → 1692
      DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins
      cl14603
      Location:419 → 611
      C2; C2 domain
      cl17036
      Location:13 → 68
      SH3; Src Homology 3 domain superfamily

    2. XM_026874269.1 → XP_026730070.1  dedicator of cytokinesis protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A7E5VP25
      Conserved Domains (4) summary
      pfam16172
      Location:88 → 410
      DOCK_N; DOCK N-terminus
      cl06123
      Location:1279 → 1689
      DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins
      cl14603
      Location:419 → 611
      C2; C2 domain
      cl17036
      Location:13 → 68
      SH3; Src Homology 3 domain superfamily

    3. XM_026874270.1 → XP_026730071.1  dedicator of cytokinesis protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A7E5VPH3
      Related
      ENSNTCP00000019358.1, ENSNTCT00000023875.1
      Conserved Domains (4) summary
      pfam16172
      Location:88 → 410
      DOCK_N; DOCK N-terminus
      cl06123
      Location:1282 → 1692
      DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins
      cl14603
      Location:419 → 611
      C2; C2 domain
      cl17036
      Location:13 → 68
      SH3; Src Homology 3 domain superfamily

    4. XM_026874271.1 → XP_026730072.1  dedicator of cytokinesis protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A7E5VP61
      Related
      ENSNTCP00000019333.1, ENSNTCT00000023848.1
      Conserved Domains (4) summary
      pfam16172
      Location:88 → 410
      DOCK_N; DOCK N-terminus
      cl06123
      Location:1247 → 1657
      DHR2_DOCK; Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins
      cl14603
      Location:419 → 611
      C2; C2 domain
      cl17036
      Location:13 → 68
      SH3; Src Homology 3 domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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