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    LOC113498369 alanine aminotransferase 1-like [ Trichoplusia ni (cabbage looper) ]

    Gene ID: 113498369, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC113498369
    Gene description
    alanine aminotransferase 1-like
    See related
    EnsemblRapid:ENSNTCG00000010496
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Trichoplusia ni
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Plusiinae; Trichoplusia
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    Genomic context

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    See LOC113498369 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current tn1 (GCF_003590095.1) 10 NC_039487.1 (12207861..12226799)

    Chromosome 10 - NC_039487.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113498148 Neighboring gene protein ALP1-like Neighboring gene low-density lipoprotein receptor-related protein megalin Neighboring gene alanine aminotransferase 1-like Neighboring gene uncharacterized LOC113498154

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039487.1 Chromosome 10 Reference tn1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome responses of the host Trichoplusia ni to infection by the baculovirus Autographa californica multiple nucleopolyhedrovirus. Chen YR, et al. J Virol, 2014 Dec. PMID 25231311, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-alanine:2-oxoglutarate aminotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alanine aminotransferase 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Trichoplusia ni Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference tn1

    Genomic

    1. NC_039487.1 Reference tn1

      Range
      12207861..12226799
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026878386.1 → XP_026734187.1  alanine aminotransferase 1-like isoform X3

      UniProtKB/TrEMBL
      A0A7E5W0X6
      Related
      ENSNTCP00000013270.1, ENSNTCT00000016601.1

    2. XM_026878387.1 → XP_026734188.1  alanine aminotransferase 1-like isoform X4

      UniProtKB/TrEMBL
      A0A7E5W0P8
      Related
      ENSNTCP00000013277.1, ENSNTCT00000016607.1

    3. XM_026878385.1 → XP_026734186.1  alanine aminotransferase 1-like isoform X2

      UniProtKB/TrEMBL
      A0A7E5W1M3
      Related
      ENSNTCP00000013265.1, ENSNTCT00000016594.1
      Conserved Domains (1) summary
      cl27741
      Location:64 → 540
      Aminotran_1_2; Aminotransferase class I and II

    4. XM_026878384.1 → XP_026734185.1  alanine aminotransferase 1-like isoform X1

      UniProtKB/TrEMBL
      A0A7E5W0R8
      Related
      ENSNTCP00000013257.1, ENSNTCT00000016586.1
    Nucleotide Protein
    Heading Accession and Version

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