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    LOC113807336 growth/differentiation factor 6-A-like [ Penaeus vannamei (Pacific white shrimp) ]

    Gene ID: 113807336, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC113807336
    Gene description
    growth/differentiation factor 6-A-like
    Locus tag
    C7M84_006267
    See related
    EnsemblRapid:LOC113807336
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Penaeus vannamei
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
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    Genomic context

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    See LOC113807336 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current ASM378908v1 (GCF_003789085.1) Unplaced Scaffold NW_020869181.1 (560252..561795, complement)

    NW_020869181.1Genomic Context describing neighboring genes Neighboring gene PE-PGRS family protein PE_PGRS18-like Neighboring gene putative uncharacterized protein ENSP00000383309 Neighboring gene uncharacterized LOC113807320 Neighboring gene small nucleolar RNA SNORA23

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020869181 Unplaced Scaffold Reference ASM378908v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in SMAD protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    growth/differentiation factor 6-A-like
    Names
    bone morphogenetic protein 5/8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Penaeus vannamei Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM378908v1 Primary Assembly

    Genomic

    1. NW_020869181.1 Reference ASM378908v1 Primary Assembly

      Range
      560252..561795 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027358575.1 → XP_027214376.1  growth/differentiation factor 6-A-like

      Related
      XP_027214376.1, XM_027358575.1
    Nucleotide Protein
    Heading Accession and Version

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