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    CD80 CD80 molecule [ Zalophus californianus (California sea lion) ]

    Gene ID: 113916214, updated on 15-Mar-2024

    Summary

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    Gene symbol
    CD80
    Gene description
    CD80 molecule
    See related
    EnsemblRapid:ENSZCAG00025004646
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zalophus californianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
    Orthologs
    human mouse all
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    Genomic context

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    See CD80 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current mZalCal1.pri.v2 (GCF_009762305.2) 1 NC_045595.1 (152113946..152152199)
    100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020884868.1 (62729197..62767456, complement)

    Chromosome 1 - NC_045595.1Genomic Context describing neighboring genes Neighboring gene popeye domain cAMP effector 2 Neighboring gene phospholipase A1 member A Neighboring gene ADP-ribosylarginine hydrolase Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene protein O-glucosyltransferase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables coreceptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in T cell costimulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-lymphocyte activation antigen CD80

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mZalCal1.pri.v2 Primary Assembly

    Genomic

    1. NC_045595.1 Reference mZalCal1.pri.v2 Primary Assembly

      Range
      152113946..152152199
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027582185.2 → XP_027437986.1  T-lymphocyte activation antigen CD80

      UniProtKB/TrEMBL
      A0A6J2C3J6
      Related
      ENSZCAP00025007057.1, ENSZCAT00025008062.1
      Conserved Domains (3) summary
      cd00096
      Location:36 → 41
      Ig; Ig strand A [structural motif]
      cd16083
      Location:142 → 232
      IgC1_CD80; Immunoglobulin constant (IgC)-like domain of antigen receptor Cluster of Differentiation (CD) 80; member of the C1-set of Ig superfamily (IgSF) domains
      cl11960
      Location:35 → 139
      Ig; Immunoglobulin domain

    2. XM_027582186.2 → XP_027437987.1  T-lymphocyte activation antigen CD80

      UniProtKB/TrEMBL
      A0A6J2C3J6
      Conserved Domains (3) summary
      cd00096
      Location:36 → 41
      Ig; Ig strand A [structural motif]
      cd16083
      Location:142 → 232
      IgC1_CD80; Immunoglobulin constant (IgC)-like domain of antigen receptor Cluster of Differentiation (CD) 80; member of the C1-set of Ig superfamily (IgSF) domains
      cl11960
      Location:35 → 139
      Ig; Immunoglobulin domain

    3. XM_035726039.1 → XP_035581932.1  T-lymphocyte activation antigen CD80

      UniProtKB/TrEMBL
      A0A6J2C3J6
      Conserved Domains (3) summary
      cd00096
      Location:36 → 41
      Ig; Ig strand A [structural motif]
      cd16083
      Location:142 → 232
      IgC1_CD80; Immunoglobulin constant (IgC)-like domain of antigen receptor Cluster of Differentiation (CD) 80; member of the C1-set of Ig superfamily (IgSF) domains
      cl11960
      Location:35 → 139
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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