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    PSMA6 proteasome 20S subunit alpha 6 [ Podarcis muralis (Common wall lizard) ]

    Gene ID: 114592520, updated on 15-Mar-2024

    Summary

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    Gene symbol
    PSMA6
    Gene description
    proteasome 20S subunit alpha 6
    See related
    Ensembl:ENSPMRG00000009160
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Podarcis muralis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
    Orthologs
    human mouse all
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    Genomic context

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    See PSMA6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current PodMur_1.0 (GCF_004329235.1) 1 NC_041312.1 (34749976..34757348, complement)

    Chromosome 1 - NC_041312.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome complex subunit SEM1-like Neighboring gene NFKB inhibitor alpha Neighboring gene protein only RNase P catalytic subunit Neighboring gene protein phosphatase 2 regulatory subunit B''gamma

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041312.1 Chromosome 1 Reference PodMur_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proteasome core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proteasome core complex, alpha-subunit complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome subunit alpha type-6
    Names
    proteasome subunit alpha 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PodMur_1.0 Primary Assembly

    Genomic

    1. NC_041312.1 Reference PodMur_1.0 Primary Assembly

      Range
      34749976..34757348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028720696.1 → XP_028576529.1  proteasome subunit alpha type-6

      UniProtKB/TrEMBL
      A0A670INH7
      Related
      ENSPMRP00000013683.1, ENSPMRT00000014619.1
      Conserved Domains (1) summary
      cd03754
      Location:8 → 220
      proteasome_alpha_type_6; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...
    Nucleotide Protein
    Heading Accession and Version

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